STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPQ89_10750Unannotated protein. (165 aa)    
Predicted Functional Partners:
pgsA
Unannotated protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.905
CPQ89_03900
Unannotated protein.
  
 
 0.790
cls
Unannotated protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
     
 0.782
CPQ89_10755
Unannotated protein.
 
     0.756
CPQ89_10760
Unannotated protein; Belongs to the HMG-CoA reductase family.
       0.718
pyk
Unannotated protein; Belongs to the pyruvate kinase family.
       0.502
metG
Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
       0.496
CPQ89_10765
Unannotated protein.
       0.467
rnmV
Unannotated protein; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.
 
     0.466
CPQ89_07225
Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family.
     
 0.450
Your Current Organism:
Lactobacillus murinus
NCBI taxonomy Id: 1622
Other names: ATCC 35020, CCUG 33904, CIP 104818, CNRZ 220, DSM 20452, IFO 14221, L. murinus, LMG 14189, LMG:14189, NBRC 14221, strain 313
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.