STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPQ89_09290Unannotated protein. (704 aa)    
Predicted Functional Partners:
CPQ89_07785
Unannotated protein.
  
  
0.934
CPQ89_03810
Unannotated protein; Belongs to the peptidase S11 family.
  
 
 0.926
CPQ89_06595
Unannotated protein.
 
 
0.915
CPQ89_08800
Unannotated protein.
 
 
 0.900
CPQ89_07110
Unannotated protein.
 
 
 0.890
gpsB
Unannotated protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
   
 
 0.852
CPQ89_06645
Unannotated protein.
   
 
 0.817
CPQ89_06320
Unannotated protein; Belongs to the SEDS family.
 
 
 
 0.776
CPQ89_06750
Unannotated protein; Belongs to the SEDS family.
 
 
 
 0.748
CPQ89_09285
Unannotated protein; Belongs to the UPF0342 family.
       0.742
Your Current Organism:
Lactobacillus murinus
NCBI taxonomy Id: 1622
Other names: ATCC 35020, CCUG 33904, CIP 104818, CNRZ 220, DSM 20452, IFO 14221, L. murinus, LMG 14189, LMG:14189, NBRC 14221, strain 313
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.