STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPQ89_10985Unannotated protein. (402 aa)    
Predicted Functional Partners:
CPQ89_10990
Unannotated protein.
 
 
 0.967
CPQ89_10995
Unannotated protein; Belongs to the FPP/GGPP synthase family.
 
  
 0.913
CPQ89_10980
Unannotated protein.
  
 
 0.853
CPQ89_00835
Unannotated protein.
 
 
 0.844
cydC
Unannotated protein.
 
   
 0.808
CPQ89_03675
Unannotated protein.
    
 0.796
CPQ89_09455
Unannotated protein.
    
 0.778
CPQ89_00005
Unannotated protein.
   
 0.769
cydD
Unannotated protein.
 
     0.762
CPQ89_04910
Unannotated protein.
    
 0.755
Your Current Organism:
Lactobacillus murinus
NCBI taxonomy Id: 1622
Other names: ATCC 35020, CCUG 33904, CIP 104818, CNRZ 220, DSM 20452, IFO 14221, L. murinus, LMG 14189, LMG:14189, NBRC 14221, strain 313
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.