STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPQ89_03830Unannotated protein. (299 aa)    
Predicted Functional Partners:
CPQ89_03835
Unannotated protein.
  
 0.981
ecfA
Unannotated protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
    
0.908
ecfA-2
Unannotated protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
    
0.903
CPQ89_07645
Unannotated protein.
    
0.775
CPQ89_03825
Unannotated protein.
       0.768
CPQ89_06910
Unannotated protein; Belongs to the ABC transporter superfamily.
 
     
0.698
CPQ89_02140
Unannotated protein; Belongs to the ABC transporter superfamily.
 
     
0.693
CPQ89_03755
Unannotated protein; Belongs to the ABC transporter superfamily.
 
     
0.644
CPQ89_03840
Unannotated protein.
       0.563
CPQ89_03820
Unannotated protein.
       0.518
Your Current Organism:
Lactobacillus murinus
NCBI taxonomy Id: 1622
Other names: ATCC 35020, CCUG 33904, CIP 104818, CNRZ 220, DSM 20452, IFO 14221, L. murinus, LMG 14189, LMG:14189, NBRC 14221, strain 313
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.