STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scpAUnannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. (255 aa)    
Predicted Functional Partners:
scpB
Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
 
 
 0.999
smc
Unannotated protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
 
 
 0.997
CPQ89_07565
Unannotated protein.
       0.857
GCA_001953785_00634
Unannotated protein.
  
 
 0.850
GCA_001953785_01322
Unannotated protein.
  
 
 0.850
CPQ89_07580
Unannotated protein; Belongs to the pseudouridine synthase RsuA family.
 
  
 0.845
xerD
Unannotated protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.752
CPQ89_07550
Unannotated protein; Belongs to the CvfB family.
  
    0.751
cmk
Unannotated protein.
 
  
 0.695
CPQ89_07555
Unannotated protein; Belongs to the Fur family.
  
    0.625
Your Current Organism:
Lactobacillus murinus
NCBI taxonomy Id: 1622
Other names: ATCC 35020, CCUG 33904, CIP 104818, CNRZ 220, DSM 20452, IFO 14221, L. murinus, LMG 14189, LMG:14189, NBRC 14221, strain 313
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.