STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPQ89_07910Unannotated protein. (313 aa)    
Predicted Functional Partners:
pyrE
Unannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
       0.478
sepF
Unannotated protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
   
 0.466
pyrD
Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate.
       0.455
pyrF
Unannotated protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
       0.455
pyrB
Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
       0.439
pyrC
Unannotated protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
       0.439
carA
Unannotated protein; Belongs to the CarA family.
       0.439
carB
Unannotated protein; Belongs to the CarB family.
       0.439
CPQ89_10020
Unannotated protein.
 
  
 0.416
CPQ89_09980
Unannotated protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.405
Your Current Organism:
Lactobacillus murinus
NCBI taxonomy Id: 1622
Other names: ATCC 35020, CCUG 33904, CIP 104818, CNRZ 220, DSM 20452, IFO 14221, L. murinus, LMG 14189, LMG:14189, NBRC 14221, strain 313
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