STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPQ89_10560Unannotated protein. (250 aa)    
Predicted Functional Partners:
CPQ89_08100
Unannotated protein; Belongs to the peptidase S41A family.
  
 0.778
CPQ89_09215
Unannotated protein; Belongs to the FtsK/SpoIIIE/SftA family.
    
 
 0.728
GCA_001953785_01102
Unannotated protein.
    
 
 0.728
CPQ89_09430
Unannotated protein; Belongs to the FtsK/SpoIIIE/SftA family.
    
 
 0.728
GCA_001953785_00992
Unannotated protein.
  
 0.695
GCA_001953785_01058
Unannotated protein.
   
 
 0.683
dltC
Unannotated protein; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall.
   
 
 0.683
acpP
Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.683
CPQ89_01505
Unannotated protein.
   
 
 0.679
CPQ89_10875
Unannotated protein; Belongs to the sigma-70 factor family.
   
  0.677
Your Current Organism:
Lactobacillus murinus
NCBI taxonomy Id: 1622
Other names: ATCC 35020, CCUG 33904, CIP 104818, CNRZ 220, DSM 20452, IFO 14221, L. murinus, LMG 14189, LMG:14189, NBRC 14221, strain 313
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.