STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001243045_01550Unannotated protein. (409 aa)    
Predicted Functional Partners:
GCA_001243045_01647
Unannotated protein.
 
 
 0.907
GCA_001243045_01544
Unannotated protein.
 
  
 
0.902
GCA_001243045_00707
Unannotated protein.
 
  
 
0.897
GCA_001243045_00639
Unannotated protein.
     
 0.875
GCA_001243045_00720
Unannotated protein.
  
  
 0.830
GCA_001243045_01678
Unannotated protein.
 
  
 
0.813
GCA_001243045_00611
Unannotated protein.
   
 
 0.788
GCA_001243045_02415
Unannotated protein.
  
  
 0.762
GCA_001243045_00687
Unannotated protein.
  
 
 0.698
GCA_001243045_02015
Unannotated protein.
  
 
 0.630
Your Current Organism:
Clostridium niameyense
NCBI taxonomy Id: 1622073
Other names: C. niameyense, CSUR P1468, Clostridium sp. MT5, DSM 100441, strain MT5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.