Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALS20502.1 | ALS21242.1 | IJ22_01100 | IJ22_08600 | Membrane protein. | Stage V sporulation protein AC. | 0.727 |
ALS20502.1 | ALS21243.1 | IJ22_01100 | IJ22_08610 | Membrane protein. | SpoVAD. | 0.740 |
ALS20502.1 | ALS21375.1 | IJ22_01100 | IJ22_09930 | Membrane protein. | Peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | 0.803 |
ALS20502.1 | ALS21376.1 | IJ22_01100 | IJ22_09940 | Membrane protein. | DNA-directed RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.746 |
ALS20502.1 | ALS21377.1 | IJ22_01100 | IJ22_09950 | Membrane protein. | Sporulation sigma factor SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.757 |
ALS20502.1 | ALS21378.1 | IJ22_01100 | IJ22_09960 | Membrane protein. | YlmC/YmxH family sporulation protein. | 0.765 |
ALS20502.1 | ALS22690.1 | IJ22_01100 | IJ22_23170 | Membrane protein. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.776 |
ALS20502.1 | ALS22779.1 | IJ22_01100 | IJ22_24060 | Membrane protein. | SpoIVB peptidase. | 0.768 |
ALS20502.1 | ALS24543.1 | IJ22_01100 | IJ22_42470 | Membrane protein. | Stage II sporulation protein R. | 0.803 |
ALS21242.1 | ALS20502.1 | IJ22_08600 | IJ22_01100 | Stage V sporulation protein AC. | Membrane protein. | 0.727 |
ALS21242.1 | ALS21243.1 | IJ22_08600 | IJ22_08610 | Stage V sporulation protein AC. | SpoVAD. | 0.991 |
ALS21242.1 | ALS21375.1 | IJ22_08600 | IJ22_09930 | Stage V sporulation protein AC. | Peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | 0.657 |
ALS21242.1 | ALS21376.1 | IJ22_08600 | IJ22_09940 | Stage V sporulation protein AC. | DNA-directed RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.773 |
ALS21242.1 | ALS21377.1 | IJ22_08600 | IJ22_09950 | Stage V sporulation protein AC. | Sporulation sigma factor SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.772 |
ALS21242.1 | ALS21378.1 | IJ22_08600 | IJ22_09960 | Stage V sporulation protein AC. | YlmC/YmxH family sporulation protein. | 0.799 |
ALS21242.1 | ALS22690.1 | IJ22_08600 | IJ22_23170 | Stage V sporulation protein AC. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.807 |
ALS21242.1 | ALS22779.1 | IJ22_08600 | IJ22_24060 | Stage V sporulation protein AC. | SpoIVB peptidase. | 0.771 |
ALS21242.1 | ALS24543.1 | IJ22_08600 | IJ22_42470 | Stage V sporulation protein AC. | Stage II sporulation protein R. | 0.783 |
ALS21243.1 | ALS20502.1 | IJ22_08610 | IJ22_01100 | SpoVAD. | Membrane protein. | 0.740 |
ALS21243.1 | ALS21242.1 | IJ22_08610 | IJ22_08600 | SpoVAD. | Stage V sporulation protein AC. | 0.991 |
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