Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALS23572.1FAD dependent oxidoreductase. (434 aa)    
Predicted Functional Partners:
ALS23571.1
NMT1-like family protein.
       0.763
gcvT
Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.729
ALS23573.1
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
     0.726
ALS23420.1
FAD dependent oxidoreductase.
  
    0.708
ALS23568.1
Amidohydrolase.
 
    0.699
ALS23569.1
Nitrate ABC transporter permease.
       0.672
ALS23570.1
ABC transporter ATP-binding protein.
  
    0.672
ALS23574.1
Subunit beta of biphenyl dioxygenase.
       0.616
ALS23567.1
Rieske [2Fe-2S] domain-containing protein.
 
     0.610
ALS23575.1
Subunit alpha of 3-phenylpropionate/cinnamic acid dioxygenase.
       0.524
Your Current Organism:
Paenibacillus naphthalenovorans
NCBI taxonomy Id: 162209
Other names: ATCC BAA-206, DSM 14203, P. naphthalenovorans, Paenibacillus naphthalenovorans Daane et al. 2002, Paenibacillus sp. PR-N1, Paenibacillus sp. PR-N16, Paenibacillus sp. PR-N5, Paenibacillus sp. PS-N1, Paenibacillus sp. PS-N6, Paenibacillus sp. SA-N1, strain PR-N1
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