Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALS23945.1acyl-CoA dehydrogenase. (590 aa)    
Predicted Functional Partners:
ALS23947.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.987
ALS23946.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.930
ALS23949.1
Subunit beta of electron transfer flavoprotein.
 
 
 0.913
ALS23950.1
Subunit alpha of electron transfer flavoprotein.
 
 
 0.894
ALS23073.1
Subunit beta of electron transfer flavoprotein.
 
 
 0.869
ALS21836.1
Subunit beta of electron transfer flavoprotein.
 
 
 0.857
ALS21837.1
Subunit alpha of electron transfer flavoprotein.
 
 0.846
ALS22938.1
Subunit beta of electron transfer flavoprotein.
 
 
 0.844
ALS23072.1
Subunit alpha of electron transfer flavoprotein.
 
 
 0.832
ALS22937.1
Subunit alpha of electron transfer flavoprotein.
 
 
 0.829
Your Current Organism:
Paenibacillus naphthalenovorans
NCBI taxonomy Id: 162209
Other names: ATCC BAA-206, DSM 14203, P. naphthalenovorans, Paenibacillus naphthalenovorans Daane et al. 2002, Paenibacillus sp. PR-N1, Paenibacillus sp. PR-N16, Paenibacillus sp. PR-N5, Paenibacillus sp. PS-N1, Paenibacillus sp. PS-N6, Paenibacillus sp. SA-N1, strain PR-N1
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