Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALS24005.1ABC transporter ATP-binding protein. (290 aa)    
Predicted Functional Partners:
ALS24003.1
Nitrate ABC transporter permease.
 
 0.992
ALS24004.1
Taurine ABC transporter substrate-binding protein.
 
 
 0.981
ALS20450.1
Nitrate ABC transporter permease.
 
 
 0.913
ALS21780.1
ABC transporter permease.
 
   0.829
ALS21158.1
Nitrate ABC transporter permease.
 
 
 0.800
ALS21494.1
ABC transporter permease.
 
 
 0.796
ssuD-2
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
  
    0.778
ALS25000.1
ABC transporter permease.
 
 
 0.777
ALS24335.1
ABC transporter permease.
 
   0.767
ALS21150.1
ABC transporter permease.
 
 
 0.758
Your Current Organism:
Paenibacillus naphthalenovorans
NCBI taxonomy Id: 162209
Other names: ATCC BAA-206, DSM 14203, P. naphthalenovorans, Paenibacillus naphthalenovorans Daane et al. 2002, Paenibacillus sp. PR-N1, Paenibacillus sp. PR-N16, Paenibacillus sp. PR-N5, Paenibacillus sp. PS-N1, Paenibacillus sp. PS-N6, Paenibacillus sp. SA-N1, strain PR-N1
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