STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALS24438.1Alginate regulatory protein; Belongs to the membrane-bound acyltransferase family. (384 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.974
ALS24434.1
Acyl carrier protein-like protein.
  
 
 0.967
ALS24435.1
Hypothetical protein.
 
 
   0.636
ALS20727.1
Mannose-1-phosphate guanylyltransferase.
  
  
 0.627
ALS24667.1
Mannose-1-phosphate guanylyltransferase.
  
  
 0.627
ALS24436.1
Hypothetical protein.
       0.610
ALS20585.1
ABC transporter substrate-binding protein.
 
  
 0.474
ALS23198.1
Single-stranded DNA exonuclease RecJ.
 
    0.467
ALS21910.1
Family 2 glycosyl transferase.
  
 
 0.427
ALS21847.1
poly-beta-1,6-N-acetyl-D-glucosamine synthase.
  
 
 0.424
Your Current Organism:
Paenibacillus naphthalenovorans
NCBI taxonomy Id: 162209
Other names: ATCC BAA-206, DSM 14203, P. naphthalenovorans, Paenibacillus naphthalenovorans Daane et al. 2002, Paenibacillus sp. PR-N1, Paenibacillus sp. PR-N16, Paenibacillus sp. PR-N5, Paenibacillus sp. PS-N1, Paenibacillus sp. PS-N6, Paenibacillus sp. SA-N1, strain PR-N1
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