Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VF21_02286 | VF21_04329 | A0A1B8F4R3 | A0A1B8F304 | Anaphase-promoting complex subunit 6. | Uncharacterized protein. | 0.999 |
VF21_02286 | VF21_07045 | A0A1B8F4R3 | A0A1B8ESK8 | Anaphase-promoting complex subunit 6. | Uncharacterized protein. | 0.999 |
VF21_02286 | VF21_08277 | A0A1B8F4R3 | A0A1B8ERA2 | Anaphase-promoting complex subunit 6. | CULLIN_2 domain-containing protein; Belongs to the cullin family. | 0.999 |
VF21_02286 | VF21_08348 | A0A1B8F4R3 | A0A1B8EMV7 | Anaphase-promoting complex subunit 6. | Uncharacterized protein. | 0.752 |
VF21_02286 | VF21_09054 | A0A1B8F4R3 | A0A1B8EL86 | Anaphase-promoting complex subunit 6. | DOC domain-containing protein. | 0.999 |
VF21_02286 | VF21_09097 | A0A1B8F4R3 | A0A1B8EK12 | Anaphase-promoting complex subunit 6. | ANAPC5 domain-containing protein. | 0.999 |
VF21_02876 | VF21_05118 | A0A1B8F5J5 | A0A1B8F0U5 | CDC73_C domain-containing protein. | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] | 0.993 |
VF21_02876 | VF21_05391 | A0A1B8F5J5 | A0A1B8EZ75 | CDC73_C domain-containing protein. | Uncharacterized protein. | 0.999 |
VF21_02876 | VF21_08348 | A0A1B8F5J5 | A0A1B8EMV7 | CDC73_C domain-containing protein. | Uncharacterized protein. | 0.755 |
VF21_04329 | VF21_02286 | A0A1B8F304 | A0A1B8F4R3 | Uncharacterized protein. | Anaphase-promoting complex subunit 6. | 0.999 |
VF21_04329 | VF21_07045 | A0A1B8F304 | A0A1B8ESK8 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
VF21_04329 | VF21_08277 | A0A1B8F304 | A0A1B8ERA2 | Uncharacterized protein. | CULLIN_2 domain-containing protein; Belongs to the cullin family. | 0.999 |
VF21_04329 | VF21_08348 | A0A1B8F304 | A0A1B8EMV7 | Uncharacterized protein. | Uncharacterized protein. | 0.750 |
VF21_04329 | VF21_09054 | A0A1B8F304 | A0A1B8EL86 | Uncharacterized protein. | DOC domain-containing protein. | 0.999 |
VF21_04329 | VF21_09097 | A0A1B8F304 | A0A1B8EK12 | Uncharacterized protein. | ANAPC5 domain-containing protein. | 0.999 |
VF21_05118 | VF21_02876 | A0A1B8F0U5 | A0A1B8F5J5 | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] | CDC73_C domain-containing protein. | 0.993 |
VF21_05118 | VF21_05391 | A0A1B8F0U5 | A0A1B8EZ75 | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] | Uncharacterized protein. | 0.995 |
VF21_05118 | VF21_08348 | A0A1B8F0U5 | A0A1B8EMV7 | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] | Uncharacterized protein. | 0.674 |
VF21_05118 | VF21_09097 | A0A1B8F0U5 | A0A1B8EK12 | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] | ANAPC5 domain-containing protein. | 0.479 |
VF21_05391 | VF21_02876 | A0A1B8EZ75 | A0A1B8F5J5 | Uncharacterized protein. | CDC73_C domain-containing protein. | 0.999 |
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