STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VF21_05072Uncharacterized protein. (219 aa)    
Predicted Functional Partners:
VF21_06572
Uncharacterized protein.
   
   0.637
VF21_02668
Uncharacterized protein.
   
   0.630
VF21_02208
Uncharacterized protein.
   
   0.629
VF21_03776
Ribosomal_S7 domain-containing protein.
   
   0.628
VF21_10311
Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family.
    
   0.618
VF21_10030
Uncharacterized protein.
    
   0.618
VF21_09550
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
    
   0.618
VF21_10561
Uncharacterized protein.
    
   0.618
VF21_08171
Uncharacterized protein.
    
   0.618
VF21_08220
50S ribosomal protein L2.
    
   0.618
Your Current Organism:
Pseudogymnoascus sp. 05NY08
NCBI taxonomy Id: 1622149
Other names: P. sp. 05NY08
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