STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VF21_00190Pyruvate carboxyltransferase domain-containing protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. (421 aa)    
Predicted Functional Partners:
VF21_02859
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 
 0.938
VF21_03628
Acetolactate synthase I/III small subunit.
  
 
 0.843
VF21_08541
Uncharacterized protein.
  
 
 0.824
VF21_09360
Uncharacterized protein.
  
 
 0.819
VF21_07301
Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.819
VF21_06653
Dihydroxy-acid dehydratase.
  
 
 0.819
VF21_01516
Dihydroxy-acid dehydratase.
  
 
 0.819
VF21_06172
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 
 0.805
VF21_07956
Uncharacterized protein; Belongs to the cytochrome b5 family.
    
 0.794
VF21_06957
Uncharacterized protein.
    
 0.794
Your Current Organism:
Pseudogymnoascus sp. 05NY08
NCBI taxonomy Id: 1622149
Other names: P. sp. 05NY08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.