STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE04_09509Uncharacterized protein. (756 aa)    
Predicted Functional Partners:
VE04_00107
Autophagy-related protein.
   
 0.971
VE04_08942
BZIP domain-containing protein.
   
 0.929
VE04_06217
Ubiquitin-like domain-containing protein.
   
 0.901
VE04_09971
Uncharacterized protein.
    
 0.860
VE04_00490
Uncharacterized protein.
    
 0.850
VE04_08462
Uncharacterized protein.
   
 0.794
VE04_08461
SH3 domain-containing protein.
   
 0.794
VE04_04414
Uncharacterized protein.
   
 0.794
VE04_04780
Ubiquitin-like domain-containing protein.
   
 0.788
VE04_08437
Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.
    
 0.780
Your Current Organism:
Pseudogymnoascus sp. 24MN13
NCBI taxonomy Id: 1622150
Other names: P. sp. 24MN13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.