STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE04_08995Uncharacterized protein. (278 aa)    
Predicted Functional Partners:
VE04_09170
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 0.996
VE04_07112
60S ribosomal protein L5.
  
 0.996
VE04_03692
Uncharacterized protein.
   
 0.996
VE04_04563
50S ribosomal protein L31e.
   
 0.996
VE04_03455
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.996
VE04_09020
Large subunit ribosomal protein L9e.
  
 0.995
VE04_07909
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 0.995
VE04_07186
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
  
 0.995
VE04_04612
Ribosomal protein L28e.
   
 0.995
VE04_07041
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.995
Your Current Organism:
Pseudogymnoascus sp. 24MN13
NCBI taxonomy Id: 1622150
Other names: P. sp. 24MN13
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