STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE04_08334Uncharacterized protein. (458 aa)    
Predicted Functional Partners:
VE04_06207
WD_REPEATS_REGION domain-containing protein.
    
 0.653
VE04_02719
B30.2/SPRY domain-containing protein.
    
 0.647
VE04_08975
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.605
VE04_07800
Uncharacterized protein.
    
 0.598
VE04_02926
UBA domain-containing protein.
    
 0.597
VE04_05482
ULK/ULK protein kinase.
    
 0.579
VE04_10250
Uncharacterized protein.
    
  0.576
VE04_04584
Uncharacterized protein.
    
  0.576
VE04_04826
HAD-superfamily subfamily IIA hydrolase.
    
  0.576
VE04_05298
Protein transporter sec-13; Belongs to the WD repeat SEC13 family.
    
 0.575
Your Current Organism:
Pseudogymnoascus sp. 24MN13
NCBI taxonomy Id: 1622150
Other names: P. sp. 24MN13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.