STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE04_06953Uncharacterized protein. (458 aa)    
Predicted Functional Partners:
VE04_02775
Large subunit ribosomal protein L21e.
   
   0.752
VE04_00490
Uncharacterized protein.
    
  0.722
VE04_08942
BZIP domain-containing protein.
    
  0.717
VE04_09670
Uncharacterized protein.
    
  0.710
VE04_01342
60S ribosomal protein L2.
   
 
 0.707
VE04_07186
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
   
   0.703
VE04_01864
50S ribosomal protein L2.
   
 
 0.689
VE04_08191
Uncharacterized protein.
    
 0.687
VE04_08190
Uncharacterized protein.
    
 0.687
VE04_06413
Uncharacterized protein.
  
 
0.658
Your Current Organism:
Pseudogymnoascus sp. 24MN13
NCBI taxonomy Id: 1622150
Other names: P. sp. 24MN13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.