STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE04_04385Uncharacterized protein. (337 aa)    
Predicted Functional Partners:
VE04_04640
DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.
    
 0.999
VE04_09299
Helicase C-terminal domain-containing protein.
   
 0.989
VE04_07624
3'-5' exonuclease domain-containing protein.
   
 0.989
VE04_07461
Uncharacterized protein.
    
 0.978
VE04_07462
Uncharacterized protein.
    
 0.974
VE04_03512
Replication factor C subunit 3/5.
   
 0.971
VE04_08089
Rep_fac_C domain-containing protein.
   
 0.970
VE04_08088
ATPase_AAA_core domain-containing protein.
   
 0.970
VE04_08363
Uncharacterized protein.
   
 0.967
VE04_08364
Uncharacterized protein.
   
 0.967
Your Current Organism:
Pseudogymnoascus sp. 24MN13
NCBI taxonomy Id: 1622150
Other names: P. sp. 24MN13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.