STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000981725_00116Unannotated protein. (216 aa)    
Predicted Functional Partners:
GCA_000981725_00117
Unannotated protein.
 
 
 0.998
GCA_000981725_00115
Unannotated protein.
 
 
 0.997
GCA_000981725_01702
Unannotated protein.
    
 0.720
GCA_000981725_00702
Unannotated protein.
    
  0.635
GCA_000981725_00118
Unannotated protein.
       0.596
GCA_000981725_01810
Unannotated protein.
  
 
 0.596
GCA_000981725_00870
Unannotated protein.
  
 
  0.510
GCA_000981725_00370
Unannotated protein.
      
 0.503
GCA_000981725_00119
Unannotated protein.
     
 0.498
GCA_000981725_00121
Unannotated protein.
     
 0.491
Your Current Organism:
Oceanospirillaceae bacterium ASP1002a
NCBI taxonomy Id: 1622229
Other names: O. bacterium ASP10-02a, Oceanospirillaceae bacterium ASP10-02a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.