STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000981725_01820Unannotated protein. (290 aa)    
Predicted Functional Partners:
GCA_000981725_01382
Unannotated protein.
  
   0.856
GCA_000981725_01819
Unannotated protein.
       0.773
GCA_000981725_00238
Unannotated protein.
  
 
 0.772
GCA_000981725_02292
Unannotated protein.
    
  0.757
GCA_000981725_01016
Unannotated protein.
    
  0.694
GCA_000981725_00926
Unannotated protein.
 
   
 0.625
GCA_000981725_01008
Unannotated protein.
   
 
  0.596
GCA_000981725_01818
Unannotated protein.
  
    0.581
GCA_000981725_01328
Unannotated protein.
  
    0.565
GCA_000981725_01821
Unannotated protein.
       0.556
Your Current Organism:
Oceanospirillaceae bacterium ASP1002a
NCBI taxonomy Id: 1622229
Other names: O. bacterium ASP10-02a, Oceanospirillaceae bacterium ASP10-02a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.