STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000981725_02258Unannotated protein. (157 aa)    
Predicted Functional Partners:
GCA_000981725_00956
Unannotated protein.
 
 0.995
GCA_000981725_00072
Unannotated protein.
    
 
 0.948
GCA_000981725_00495
Unannotated protein.
  
  
 0.948
GCA_000981725_01440
Unannotated protein.
   
 
 0.788
GCA_000981725_02033
Unannotated protein.
   
 
 0.788
GCA_000981725_02131
Unannotated protein.
   
 
 0.788
GCA_000981725_01188
Unannotated protein.
 
  
   0.758
GCA_000981725_00021
Unannotated protein.
  
  
 0.594
GCA_000981725_00208
Unannotated protein.
 
  
 0.587
GCA_000981725_00597
Unannotated protein.
    
   0.580
Your Current Organism:
Oceanospirillaceae bacterium ASP1002a
NCBI taxonomy Id: 1622229
Other names: O. bacterium ASP10-02a, Oceanospirillaceae bacterium ASP10-02a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.