STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000981705_01051Unannotated protein. (107 aa)    
Predicted Functional Partners:
GCA_000981705_02099
Unannotated protein.
 
 
 0.969
GCA_000981705_00868
Unannotated protein.
 
 0.959
GCA_000981705_02067
Unannotated protein.
 
 
 0.954
GCA_000981705_02098
Unannotated protein.
  
 
 0.884
GCA_000981705_00869
Unannotated protein.
   
 0.794
GCA_000981705_02354
Unannotated protein.
 
  
 0.790
GCA_000981705_00844
Unannotated protein.
 
    0.750
GCA_000981705_01670
Unannotated protein.
    
 0.703
GCA_000981705_01052
Unannotated protein.
       0.680
GCA_000981705_01913
Unannotated protein.
    
 0.627
Your Current Organism:
Rhodobacteraceae bacterium ASP1004a
NCBI taxonomy Id: 1622230
Other names: R. bacterium ASP10-04a, Rhodobacteraceae bacterium ASP10-04a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.