STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001183545_01234Unannotated protein. (160 aa)    
Predicted Functional Partners:
GCA_001183545_01233
Unannotated protein.
 
     0.850
GCA_001183545_02543
Unannotated protein.
  
     0.711
GCA_001183545_01930
Unannotated protein.
  
     0.621
GCA_001183545_01235
Unannotated protein.
       0.614
GCA_001183545_02098
Unannotated protein.
  
    0.594
GCA_001183545_00496
Unannotated protein.
  
     0.591
GCA_001183545_01926
Unannotated protein.
  
     0.562
GCA_001183545_01772
Unannotated protein.
  
     0.552
GCA_001183545_03379
Unannotated protein.
 
     0.536
GCA_001183545_01517
Unannotated protein.
  
     0.522
Your Current Organism:
Cellvibrio sp. pealriver
NCBI taxonomy Id: 1622269
Other names: C. sp. pealriver
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.