STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403575_04011Unannotated protein. (263 aa)    
Predicted Functional Partners:
GCA_001403575_01566
Unannotated protein.
 
   
 0.664
GCA_001403575_04010
Unannotated protein.
       0.642
GCA_001403575_03784
Unannotated protein.
 
  
  0.562
GCA_001403575_02535
Unannotated protein.
 
    0.557
GCA_001403575_02536
Unannotated protein.
    
 0.527
GCA_001403575_00506
Unannotated protein.
    
  0.506
GCA_001403575_03760
Unannotated protein.
    
  0.506
GCA_001403575_02433
Unannotated protein.
    
  0.504
GCA_001403575_03697
Unannotated protein.
    
  0.504
GCA_001403575_00503
Unannotated protein.
  
 
  0.470
Your Current Organism:
Ruminococcaceae bacterium cv2
NCBI taxonomy Id: 1627893
Other names: R. bacterium cv2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.