STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJH78367.1Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)    
Predicted Functional Partners:
KJH78368.1
Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.990
KJH78413.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.986
KJH78366.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.980
KJH74315.1
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.957
glnQ-2
Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.956
glnQ
Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.955
KJH74919.1
Cystine transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.948
glnQ-3
Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.948
KJH74917.1
Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.944
KJH75563.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.938
Your Current Organism:
Pseudomonas sp. ES333
NCBI taxonomy Id: 1628833
Other names: P. sp. ES3-33, Pseudomonas sp. ES3-33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.