node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KYP82936.1 | rbn | WB66_19880 | WB66_19875 | Catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease Z; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | 0.636 |
KYP85023.1 | rbn | WB66_09340 | WB66_19875 | Glucose-6-phosphate 1-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glucose-6-phosphate 1-epimerase family. | Ribonuclease Z; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | 0.718 |
KYP86564.1 | rbn | WB66_00725 | WB66_19875 | Involved in the processing of the 5'end of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease Z; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | 0.697 |
KYP86564.1 | rnpA | WB66_00725 | WB66_20735 | Involved in the processing of the 5'end of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.659 |
KYP86564.1 | rnr | WB66_00725 | WB66_02685 | Involved in the processing of the 5'end of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Exoribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family. RNase R subfamily. | 0.777 |
KYP86564.1 | rph | WB66_00725 | WB66_21210 | Involved in the processing of the 5'end of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.779 |
ilvA | rbn | WB66_00255 | WB66_19875 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Ribonuclease Z; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | 0.431 |
infB | rbn | WB66_01080 | WB66_19875 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribonuclease Z; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | 0.425 |
infB | rnr | WB66_01080 | WB66_02685 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Exoribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family. RNase R subfamily. | 0.450 |
infB | rpoC | WB66_01080 | WB66_00095 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.922 |
rbn | KYP82936.1 | WB66_19875 | WB66_19880 | Ribonuclease Z; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.636 |
rbn | KYP85023.1 | WB66_19875 | WB66_09340 | Ribonuclease Z; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Glucose-6-phosphate 1-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glucose-6-phosphate 1-epimerase family. | 0.718 |
rbn | KYP86564.1 | WB66_19875 | WB66_00725 | Ribonuclease Z; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Involved in the processing of the 5'end of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.697 |
rbn | ilvA | WB66_19875 | WB66_00255 | Ribonuclease Z; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.431 |
rbn | infB | WB66_19875 | WB66_01080 | Ribonuclease Z; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.425 |
rbn | rnpA | WB66_19875 | WB66_20735 | Ribonuclease Z; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.658 |
rbn | rnr | WB66_19875 | WB66_02685 | Ribonuclease Z; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Exoribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family. RNase R subfamily. | 0.479 |
rbn | rph | WB66_19875 | WB66_21210 | Ribonuclease Z; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.553 |
rbn | rpiA | WB66_19875 | WB66_17610 | Ribonuclease Z; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.441 |
rbn | rpoC | WB66_19875 | WB66_00095 | Ribonuclease Z; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.422 |