Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN46705.1 | KRN46706.1 | IV50_GL000990 | IV50_GL000991 | Hypothetical protein. | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | 0.899 |
KRN46705.1 | argR2 | IV50_GL000990 | IV50_GL000993 | Hypothetical protein. | Arginine catabolic regulator; Regulates arginine biosynthesis genes. | 0.800 |
KRN46705.1 | folD_2 | IV50_GL000990 | IV50_GL000988 | Hypothetical protein. | Bifunctional protein methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.828 |
KRN46705.1 | hepT_1 | IV50_GL000990 | IV50_GL000708 | Hypothetical protein. | Trans-hexaprenyltranstransferase. | 0.450 |
KRN46705.1 | tlyA | IV50_GL000990 | IV50_GL000992 | Hypothetical protein. | Hemolysin A. | 0.809 |
KRN46705.1 | xseA | IV50_GL000990 | IV50_GL000989 | Hypothetical protein. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.999 |
KRN46706.1 | KRN46705.1 | IV50_GL000991 | IV50_GL000990 | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | Hypothetical protein. | 0.899 |
KRN46706.1 | KRN46866.1 | IV50_GL000991 | IV50_GL000130 | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | Diphosphomevalonate decarboxylase. | 0.975 |
KRN46706.1 | argR2 | IV50_GL000991 | IV50_GL000993 | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | Arginine catabolic regulator; Regulates arginine biosynthesis genes. | 0.802 |
KRN46706.1 | cmk_2 | IV50_GL000991 | IV50_GL000328 | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | Cytidylate kinase. | 0.730 |
KRN46706.1 | fni_2 | IV50_GL000991 | IV50_GL000128 | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | Isopentenyl-diphosphate delta-isomerase (ipp isomerase). | 0.972 |
KRN46706.1 | folD_2 | IV50_GL000991 | IV50_GL000988 | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | Bifunctional protein methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.839 |
KRN46706.1 | hepT_1 | IV50_GL000991 | IV50_GL000708 | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | Trans-hexaprenyltranstransferase. | 0.968 |
KRN46706.1 | tlyA | IV50_GL000991 | IV50_GL000992 | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | Hemolysin A. | 0.875 |
KRN46706.1 | uppS | IV50_GL000991 | IV50_GL001225 | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.986 |
KRN46706.1 | xseA | IV50_GL000991 | IV50_GL000989 | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.908 |
KRN46866.1 | KRN46706.1 | IV50_GL000130 | IV50_GL000991 | Diphosphomevalonate decarboxylase. | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | 0.975 |
KRN46866.1 | fni_2 | IV50_GL000130 | IV50_GL000128 | Diphosphomevalonate decarboxylase. | Isopentenyl-diphosphate delta-isomerase (ipp isomerase). | 0.998 |
KRN46866.1 | hepT_1 | IV50_GL000130 | IV50_GL000708 | Diphosphomevalonate decarboxylase. | Trans-hexaprenyltranstransferase. | 0.685 |
KRN46866.1 | uppS | IV50_GL000130 | IV50_GL001225 | Diphosphomevalonate decarboxylase. | Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.538 |
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