Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN45734.1 | KRN46080.1 | IV50_GL001461 | IV50_GL001053 | Hypothetical protein. | Cell division septal protein. | 0.999 |
KRN45734.1 | ftsA | IV50_GL001461 | IV50_GL001054 | Hypothetical protein. | Cell division protein ftsa; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.427 |
KRN45734.1 | pbpX | IV50_GL001461 | IV50_GL001049 | Hypothetical protein. | Penicillin-binding protein 2B. | 0.448 |
KRN45734.1 | penA_2 | IV50_GL001461 | IV50_GL000824 | Hypothetical protein. | Penicillin-binding protein. | 0.422 |
KRN46080.1 | KRN45734.1 | IV50_GL001053 | IV50_GL001461 | Cell division septal protein. | Hypothetical protein. | 0.999 |
KRN46080.1 | ftsA | IV50_GL001053 | IV50_GL001054 | Cell division septal protein. | Cell division protein ftsa; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.991 |
KRN46080.1 | ftsK_1 | IV50_GL001053 | IV50_GL001147 | Cell division septal protein. | DNA segregation ATPase FtsK SpoIIIE related protein. | 0.832 |
KRN46080.1 | ftsW_1 | IV50_GL001053 | IV50_GL000053 | Cell division septal protein. | Cell division protein FtsW; Belongs to the SEDS family. | 0.857 |
KRN46080.1 | murC_1 | IV50_GL001053 | IV50_GL000071 | Cell division septal protein. | UDP-N-acetylmuramate--L-alanine ligase. | 0.922 |
KRN46080.1 | murD | IV50_GL001053 | IV50_GL001051 | Cell division septal protein. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.970 |
KRN46080.1 | murG | IV50_GL001053 | IV50_GL001052 | Cell division septal protein. | Acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.980 |
KRN46080.1 | pbpX | IV50_GL001053 | IV50_GL001049 | Cell division septal protein. | Penicillin-binding protein 2B. | 0.942 |
KRN46080.1 | penA_2 | IV50_GL001053 | IV50_GL000824 | Cell division septal protein. | Penicillin-binding protein. | 0.886 |
KRN46080.1 | rodA_2 | IV50_GL001053 | IV50_GL001238 | Cell division septal protein. | Cell division membrane protein; Belongs to the SEDS family. | 0.835 |
ftsA | KRN45734.1 | IV50_GL001054 | IV50_GL001461 | Cell division protein ftsa; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | Hypothetical protein. | 0.427 |
ftsA | KRN46080.1 | IV50_GL001054 | IV50_GL001053 | Cell division protein ftsa; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | Cell division septal protein. | 0.991 |
ftsA | ftsK_1 | IV50_GL001054 | IV50_GL001147 | Cell division protein ftsa; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | DNA segregation ATPase FtsK SpoIIIE related protein. | 0.403 |
ftsA | ftsW_1 | IV50_GL001054 | IV50_GL000053 | Cell division protein ftsa; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | Cell division protein FtsW; Belongs to the SEDS family. | 0.688 |
ftsA | murC_1 | IV50_GL001054 | IV50_GL000071 | Cell division protein ftsa; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | UDP-N-acetylmuramate--L-alanine ligase. | 0.713 |
ftsA | murD | IV50_GL001054 | IV50_GL001051 | Cell division protein ftsa; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.853 |
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