Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KRN46094.1Hypothetical protein. (319 aa)    
Predicted Functional Partners:
xpsE
ComG operon protein 1.
  
 
 0.998
KRN46095.1
Hypothetical protein.
 
  
 0.996
comEA_2
Hypothetical protein.
  
  
 0.883
KRN45864.1
Superfamily ii dna rna helicase.
   
  
 0.849
KRN46099.1
Adenine-specific DNA methylase.
 
     0.745
KRN46885.1
ABC transporter EcsB.
 
     0.709
ssb
Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
    0.610
KRN46080.1
Cell division septal protein.
 
     0.600
KRN45707.1
Competence protein ec.
   
  
 0.598
KRN46096.1
Hypothetical protein.
       0.577
Your Current Organism:
Weissella viridescens
NCBI taxonomy Id: 1629
Other names: ATCC 12706, BCRC 11650, CCM 56, CCRC 11650, CCRC:11650, CCUG 21533, CCUG 30502, CECT 283, CIP 102810, DSM 20410, IAM 13546, LMG 3507, LMG:3507, Lactobacillus viridescens, NCCB 71015, NCIB 8965, NCIMB 8965, NCTC 13645, NCTC 13770, W. viridescens
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