Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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fmtmethionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. (318 aa)    
Predicted Functional Partners:
rsmB
RNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.995
stp_3
Serine threonine protein phosphatase.
  
   0.975
metG_2
methionyl-tRNA synthetase.
  
 
 0.948
fhs1
Formate-tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family.
    
 0.937
purN
Phosphoribosylglycinamide formyltransferase.
    
 0.921
purH_3
Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase IMP cyclohydrolase.
     
 0.918
priA_1
Primosomal replication protein N (factor Y).
 
    0.914
def2
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
 
 
 0.854
folD_2
Bifunctional protein methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
 
  
 0.829
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.827
Your Current Organism:
Weissella viridescens
NCBI taxonomy Id: 1629
Other names: ATCC 12706, BCRC 11650, CCM 56, CCRC 11650, CCRC:11650, CCUG 21533, CCUG 30502, CECT 283, CIP 102810, DSM 20410, IAM 13546, LMG 3507, LMG:3507, Lactobacillus viridescens, NCCB 71015, NCIB 8965, NCIMB 8965, NCTC 13645, NCTC 13770, W. viridescens
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