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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN46125.1Hypothetical protein. (343 aa)    
Predicted Functional Partners:
KRN45885.1
Membrane protein.
  
     0.769
KRN46636.1
Hypothetical protein.
  
     0.723
KRN46558.1
Dutpase.
  
    0.709
KRN46557.1
Hypothetical protein.
  
     0.705
KRN46622.1
Muramidase.
 
    0.683
KRN47201.1
Hypothetical protein.
  
     0.680
KRN47137.1
Hypothetical protein.
  
     0.651
KRN46890.1
Hypothetical protein.
  
    0.641
KRN46274.1
Hypothetical protein.
  
  
 0.625
KRN46194.1
Hypothetical protein.
  
     0.601
Your Current Organism:
Weissella viridescens
NCBI taxonomy Id: 1629
Other names: ATCC 12706, BCRC 11650, CCM 56, CCRC 11650, CCRC:11650, CCUG 21533, CCUG 30502, CECT 283, CIP 102810, DSM 20410, IAM 13546, LMG 3507, LMG:3507, Lactobacillus viridescens, NCCB 71015, NCIB 8965, NCIMB 8965, NCTC 13645, NCTC 13770, W. viridescens
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