Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
proC_2Pyrroline-5-carboxylate reductase. (263 aa)    
Predicted Functional Partners:
KRN47008.1
Pyrroline-5-carboxylate reductase.
  
  
 
0.929
proC_3
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
  
  
 
0.928
rodA_2
Cell division membrane protein; Belongs to the SEDS family.
       0.593
KRN45896.1
Hypothetical protein.
       0.584
mreB_2
Rod shape-determining protein MreB.
       0.584
KRN45898.1
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diamino pimelate--D-alanyl-D-alanine ligase.
       0.426
Your Current Organism:
Weissella viridescens
NCBI taxonomy Id: 1629
Other names: ATCC 12706, BCRC 11650, CCM 56, CCRC 11650, CCRC:11650, CCUG 21533, CCUG 30502, CECT 283, CIP 102810, DSM 20410, IAM 13546, LMG 3507, LMG:3507, Lactobacillus viridescens, NCCB 71015, NCIB 8965, NCIMB 8965, NCTC 13645, NCTC 13770, W. viridescens
Server load: medium (44%) [HD]