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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
proC_2Pyrroline-5-carboxylate reductase. (263 aa)    
Predicted Functional Partners:
rodA_2
Cell division membrane protein; Belongs to the SEDS family.
       0.593
KRN45896.1
Hypothetical protein.
       0.584
mreB_2
Rod shape-determining protein MreB.
       0.584
guaA_1
GMP synthase.
     
 0.516
adhE_1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase.
  
 
 0.466
pyk_1
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.430
KRN45898.1
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diamino pimelate--D-alanyl-D-alanine ligase.
       0.429
nudF
ADP-ribose diphosphatase.
   
   0.400
Your Current Organism:
Weissella viridescens
NCBI taxonomy Id: 1629
Other names: ATCC 12706, BCRC 11650, CCM 56, CCRC 11650, CCRC:11650, CCUG 21533, CCUG 30502, CECT 283, CIP 102810, DSM 20410, IAM 13546, LMG 3507, LMG:3507, Lactobacillus viridescens, NCCB 71015, NCIB 8965, NCIMB 8965, NCTC 13645, NCTC 13770, W. viridescens
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