STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000972495_00314Unannotated protein. (293 aa)    
Predicted Functional Partners:
GCA_000972495_00313
Unannotated protein.
 
   0.868
GCA_000972495_00310
Unannotated protein.
 
 
   0.850
GCA_000972495_04171
Unannotated protein.
 
 
 
 0.828
GCA_000972495_00309
Unannotated protein.
 
     0.799
GCA_000972495_00065
Unannotated protein.
  
 
   0.783
GCA_000972495_00312
Unannotated protein.
 
   0.773
GCA_000972495_01239
Unannotated protein.
  
     0.731
GCA_000972495_05024
Unannotated protein.
  
   0.731
GCA_000972495_04114
Unannotated protein.
  
     0.728
GCA_000972495_03259
Unannotated protein.
  
     0.712
Your Current Organism:
Hymenobacter terrenus
NCBI taxonomy Id: 1629124
Other names: H. terrenus, Hymenobacter sp. MIMtkLc17, Hymenobacter terrenus Tang et al. 2015, KCTC 42636, MCCC 1K00507, strain MIMtkLc17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.