STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000972495_01685Unannotated protein. (472 aa)    
Predicted Functional Partners:
GCA_000972495_01686
Unannotated protein.
       0.773
GCA_000972495_01687
Unannotated protein.
       0.773
GCA_000972495_01684
Unannotated protein.
       0.741
GCA_000972495_02657
Unannotated protein.
 
  
  0.618
GCA_000972495_02656
Unannotated protein.
  
  
  0.584
GCA_000972495_01506
Unannotated protein.
  
     0.560
GCA_000972495_01326
Unannotated protein.
  
     0.554
GCA_000972495_02666
Unannotated protein.
  
  
  0.554
GCA_000972495_02667
Unannotated protein.
  
  
  0.546
GCA_000972495_03947
Unannotated protein.
  
     0.545
Your Current Organism:
Hymenobacter terrenus
NCBI taxonomy Id: 1629124
Other names: H. terrenus, Hymenobacter sp. MIMtkLc17, Hymenobacter terrenus Tang et al. 2015, KCTC 42636, MCCC 1K00507, strain MIMtkLc17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.