STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJS00518.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (459 aa)    
Predicted Functional Partners:
KJS00519.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.883
KJS00358.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.802
KJS00104.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.743
KJR96652.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.743
KJR96739.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.741
KJR96999.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.731
KJR99450.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.724
KJS03568.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.723
KJS00916.1
RNA polymerase subunit sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.716
KJR99298.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.714
Your Current Organism:
Desulfobulbaceae bacterium BRHc16a
NCBI taxonomy Id: 1629713
Other names: D. bacterium BRH_c16a, Desulfobulbaceae bacterium BRH_c16a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.