STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJS00087.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family. (289 aa)    
Predicted Functional Partners:
KJS00086.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
KJR98703.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.958
KJR98250.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.958
KJS02715.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.955
KJR99104.1
Cobyrinic acid a,c-diamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.948
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.853
KJR98618.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.815
rsmG
16S rRNA methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.814
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
  
 0.683
mnmE
tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
  
 0.661
Your Current Organism:
Desulfobulbaceae bacterium BRHc16a
NCBI taxonomy Id: 1629713
Other names: D. bacterium BRH_c16a, Desulfobulbaceae bacterium BRH_c16a
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