KJS00154.1 protein (Desulfobulbaceae bacterium BRHc16a)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KJS00154.1

Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)

Predicted Functional Partners:

KJS00127.1

0.839

KJR97429.1

0.793

KJS00123.1

0.755

KJR97424.1

0.732

KJR97427.1

0.582

KJS00124.1

0.566

KJS00125.1

0.566

KJS00126.1

0.566

KJR97425.1

0.528

KJS00129.1

0.514

Your Current Organism:

Desulfobulbaceae bacterium BRHc16a

NCBI taxonomy Id: 1629713
Other names: D. bacterium BRH_c16a, Desulfobulbaceae bacterium BRH_c16a

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KJR97424.1	KJR97425.1	VR65_23885	VR65_23890	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.	0.991
KJR97424.1	KJR97427.1	VR65_23885	VR65_23900	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
KJR97424.1	KJR97429.1	VR65_23885	VR65_23910	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978
KJR97424.1	KJS00123.1	VR65_23885	VR65_14605	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.661
KJR97424.1	KJS00127.1	VR65_23885	VR65_14625	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.676
KJR97424.1	KJS00129.1	VR65_23885	VR65_14640	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.970
KJR97424.1	KJS00154.1	VR65_23885	VR65_14600	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.732
KJR97425.1	KJR97424.1	VR65_23890	VR65_23885	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
KJR97425.1	KJR97427.1	VR65_23890	VR65_23900	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.928
KJR97425.1	KJR97429.1	VR65_23890	VR65_23910	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960
KJR97425.1	KJS00123.1	VR65_23890	VR65_14605	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.449
KJR97425.1	KJS00127.1	VR65_23890	VR65_14625	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
KJR97425.1	KJS00129.1	VR65_23890	VR65_14640	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.909
KJR97425.1	KJS00154.1	VR65_23890	VR65_14600	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.528
KJR97427.1	KJR97424.1	VR65_23900	VR65_23885	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
KJR97427.1	KJR97425.1	VR65_23900	VR65_23890	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.	0.928
KJR97427.1	KJR97429.1	VR65_23900	VR65_23910	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
KJR97427.1	KJS00127.1	VR65_23900	VR65_14625	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.896
KJR97427.1	KJS00129.1	VR65_23900	VR65_14640	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967
KJR97427.1	KJS00154.1	VR65_23900	VR65_14600	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.582