STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJS00131.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)    
Predicted Functional Partners:
KJS00155.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.799
KJS00145.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.745
KJR96332.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.738
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.719
KJS00130.1
Secretion system protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.666
KJS00129.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.657
KJR96999.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.641
KJS03103.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.632
KJR99300.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.627
KJS00128.1
Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.620
Your Current Organism:
Desulfobulbaceae bacterium BRHc16a
NCBI taxonomy Id: 1629713
Other names: D. bacterium BRH_c16a, Desulfobulbaceae bacterium BRH_c16a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.