STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJS16671.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (484 aa)    
Predicted Functional Partners:
KJS18223.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.592
KJS16672.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.577
KJS18280.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.563
KJS18224.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.539
KJS16360.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.490
KJS15259.1
Sulfate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.449
KJS18459.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.433
KJS14836.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.433
Your Current Organism:
Peptococcaceae bacterium BRHc4b
NCBI taxonomy Id: 1629717
Other names: P. bacterium BRH_c4b, Peptococcaceae bacterium BRH_c4b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.