STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJS35650.1Fe-S osidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (503 aa)    
Predicted Functional Partners:
KJS35648.1
Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.935
KJS35651.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.926
KJS35649.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.819
KJS35652.1
Pyridoxamine 5-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
 
     0.742
KJS37495.1
Polyphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.718
KJS35653.1
Acetoin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.663
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
  
 
 0.661
KJS35654.1
Acetoin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.649
nifH
Nitrogenase reductase; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
  
 
 0.647
KJS44567.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.597
Your Current Organism:
Rhodospirillaceae bacterium BRHc57
NCBI taxonomy Id: 1629718
Other names: R. bacterium BRH_c57, Rhodospirillaceae bacterium BRH_c57
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.