STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJS21875.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)    
Predicted Functional Partners:
KJS21876.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
KJS21656.1
Iron-sulfur protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.727
KJS21874.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.702
KJS21873.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.697
KJS22176.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.632
katE
Hydroperoxidase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.588
KJS21886.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
       0.559
KJS22127.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.534
KJS19330.1
Metallo-beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.530
KJS21872.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.518
Your Current Organism:
Clostridiaceae bacterium BRHc20a
NCBI taxonomy Id: 1629719
Other names: C. bacterium BRH_c20a, Clostridiaceae bacterium BRH_c20a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.