STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJS21558.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)    
Predicted Functional Partners:
KJS21556.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
KJS22054.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.995
KJS20218.1
Macrolide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.995
KJS23196.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.984
KJS23195.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.958
KJS21955.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.948
KJS23330.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.913
KJS22303.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.908
KJS21557.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.850
KJS22955.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.847
Your Current Organism:
Clostridiaceae bacterium BRHc20a
NCBI taxonomy Id: 1629719
Other names: C. bacterium BRH_c20a, Clostridiaceae bacterium BRH_c20a
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.