STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJS20120.1Histone deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)    
Predicted Functional Partners:
KJS19045.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.977
KJS20439.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.958
KJS19638.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.936
KJS21967.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.905
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
    
 0.902
KJS20986.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.902
KJS20090.1
Hydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.900
KJS21503.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.894
KJS23237.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.881
KJS20434.1
Helicase SNF2; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.881
Your Current Organism:
Clostridiaceae bacterium BRHc20a
NCBI taxonomy Id: 1629719
Other names: C. bacterium BRH_c20a, Clostridiaceae bacterium BRH_c20a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.