STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI42216.1O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. (170 aa)    
Predicted Functional Partners:
SFJ08466.1
Hypothetical protein.
 
      0.704
cmk-2
Cytidylate kinase.
 
      0.668
SFI42198.1
NTP pyrophosphatase, house-cleaning of non-canonical NTPs.
       0.499
SFI75215.1
Putative ATPase.
      0.451
Your Current Organism:
Treponema bryantii
NCBI taxonomy Id: 163
Other names: ATCC 33254, T. bryantii, strain RUS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.