STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI43062.1Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. (99 aa)    
Predicted Functional Partners:
SFI43052.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
 
 0.990
SFI81216.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.973
SFI68588.1
Histidine kinase-like ATPase domain-containing protein.
  
 0.960
SFI51550.1
Flagellar motor switch protein FliN/FliY; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
   0.959
SFI68562.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.945
SFI54525.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 
 0.942
SFI43028.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
 
 0.936
SFI44636.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
 
 0.935
SFI68629.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
 
 0.930
SFJ01438.1
Stage II sporulation protein E (SpoIIE).
 
 0.924
Your Current Organism:
Treponema bryantii
NCBI taxonomy Id: 163
Other names: ATCC 33254, T. bryantii, strain RUS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.