STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI43994.1Lipoprotein-releasing system ATP-binding protein. (218 aa)    
Predicted Functional Partners:
SFI45364.1
Putative ABC transport system permease protein.
  
 0.995
SFI95998.1
Putative ABC transport system permease protein.
 0.990
SFI43982.1
Putative ABC transport system permease protein.
  
 0.951
SFI45989.1
Putative ABC transport system permease protein.
 
 0.862
SFI49786.1
ABC-type transport system, involved in lipoprotein release, permease component.
 
 0.850
SFI45998.1
Putative ABC transport system permease protein.
 
 0.840
SFI49806.1
ABC-type transport system, involved in lipoprotein release, permease component.
  
 0.792
SFI67172.1
Lipoprotein-releasing system permease protein.
  
 0.792
SFI67211.1
Lipoprotein-releasing system permease protein.
  
 0.792
SFI43960.1
Protein of unknown function.
  
    0.788
Your Current Organism:
Treponema bryantii
NCBI taxonomy Id: 163
Other names: ATCC 33254, T. bryantii, strain RUS-1
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