STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI45415.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (230 aa)    
Predicted Functional Partners:
SFI92042.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.988
SFI54525.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.986
SFI45393.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.969
SFI80632.1
HAMP domain-containing protein.
 
 0.921
SFI38438.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.918
SFI51439.1
Signal transduction histidine kinase.
 
 0.905
SFI53391.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
 
 0.889
SFI81340.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.888
SFI92884.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.878
SFI81216.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.868
Your Current Organism:
Treponema bryantii
NCBI taxonomy Id: 163
Other names: ATCC 33254, T. bryantii, strain RUS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.